Uses of Class
com.banda.chemistry.domain.AcInteractionSeries

Packages that use AcInteractionSeries

Package	Description
com.banda.chemistry.business
com.banda.chemistry.business.factory
com.banda.chemistry.domain

Uses of AcInteractionSeries in com.banda.chemistry.business

Methods in com.banda.chemistry.business that return AcInteractionSeries

Modifier and Type	Method and Description
AcInteractionSeries	AcReplicator.cloneActionSeriesWithActions(AcInteractionSeries actionSeries)
AcInteractionSeries	AcReplicator.cloneActionSeriesWithActionsRecursively(AcInteractionSeries actionSeries)
AcInteractionSeries	AcReplicator.cloneActionSeriesWithActionsRecursively(AcInteractionSeries actionSeries, Map<AcInteractionSeries,AcInteractionSeries> actionSeriesCloneMap)

Methods in com.banda.chemistry.business with parameters of type AcInteractionSeries

Modifier and Type	Method and Description
void	ArtificialChemistryUtil.addInteractions(AcInteractionSeries targetInteractionSeries, AcInteractionSeries sourceInteractionSeries)
AcInteractionSeries	AcReplicator.cloneActionSeriesWithActions(AcInteractionSeries actionSeries)
AcInteractionSeries	AcReplicator.cloneActionSeriesWithActionsRecursively(AcInteractionSeries actionSeries)
AcInteractionSeries	AcReplicator.cloneActionSeriesWithActionsRecursively(AcInteractionSeries actionSeries, Map<AcInteractionSeries,AcInteractionSeries> actionSeriesCloneMap)
Collection<AcInteractionVariable>	ArtificialChemistryUtil.getNewInteractionVariables(AcInteractionSeries interactionSeries, AcInteractionSeries sourceInteractionSeries)
Pair<Collection<AcSpeciesInteraction>,Collection<AcInteractionVariableAssignment>>	ArtificialChemistryUtil.getSpeciesAndInteractionVariablesToRemove(AcInteractionSeries interactionSeries, AcInteractionSeries sourceInteractionSeries)
void	AcReplicator.nullIdAndVersionRecursively(AcInteractionSeries actionSeries)
void	ArtificialChemistryUtil.replaceSpeciesSet(AcInteractionSeries interactionSeries, AcSpeciesSet newSpeciesSet)

Method parameters in com.banda.chemistry.business with type arguments of type AcInteractionSeries

Modifier and Type	Method and Description
AcInteractionSeries	AcReplicator.cloneActionSeriesWithActionsRecursively(AcInteractionSeries actionSeries, Map<AcInteractionSeries,AcInteractionSeries> actionSeriesCloneMap)
AcInteractionSeries	AcReplicator.cloneActionSeriesWithActionsRecursively(AcInteractionSeries actionSeries, Map<AcInteractionSeries,AcInteractionSeries> actionSeriesCloneMap)

Uses of AcInteractionSeries in com.banda.chemistry.business.factory

Methods in com.banda.chemistry.business.factory that return AcInteractionSeries

Modifier and Type

Method and Description

AcInteractionSeries

AcInteractionSeriesFactory.createTemporalActionASWithInit(AcSpeciesSet speciesSet, com.banda.function.domain.BooleanFunction.BooleanFunctionType functionType, int timeWindowLength, com.banda.math.domain.rand.RandomDistribution<Double> initInternalConcDistribution, com.banda.math.domain.rand.RandomDistribution<Double> initWeightConcDistribution, AcConcentrationLevel inputConcentrationLevel, AcConcentrationLevel feedbackConcentrationLevel, int actionsNum, int afterInitStartingTimeStep, int actionInterval, boolean nullOutputSpecies)

Methods in com.banda.chemistry.business.factory with parameters of type AcInteractionSeries

Modifier and Type	Method and Description
AcTranslationSeries	AcTranslationSeriesFactory.createSimplePeriodicFullTS(com.banda.function.domain.AggregateFunction inputSpeciesStateTransFunction, com.banda.function.domain.AggregateFunction outputSpeciesStateTransFunction, com.banda.function.domain.AggregateFunction feedbackSpeciesStateTransFunction, AcConcentrationLevel inputConcentrationLevel, AcConcentrationLevel outputConcentrationLevel, AcConcentrationLevel feedbackConcentrationLevel, com.banda.function.domain.AggregateFunction internalSpeciesStateTransFunction, AcInteractionSeries quasiPeriodicActionSeries)
AcTranslationSeries	AcTranslationSeriesFactory.createSimplePeriodicInputOutputFeedbackTS(com.banda.function.domain.AggregateFunction inputSpeciesStateTransFunction, com.banda.function.domain.AggregateFunction outputSpeciesStateTransFunction, com.banda.function.domain.AggregateFunction feedbackSpeciesStateTransFunction, AcConcentrationLevel inputConcentrationLevel, AcConcentrationLevel outputConcentrationLevel, AcConcentrationLevel feedbackConcentrationLevel, AcInteractionSeries quasiPeriodicActionSeries)

Uses of AcInteractionSeries in com.banda.chemistry.domain

Methods in com.banda.chemistry.domain that return AcInteractionSeries

Modifier and Type	Method and Description
AcInteractionSeries	AcInteraction.getActionSeries()
AcInteractionSeries	AcEvaluatedActionSeries.getActionSeries()
AcInteractionSeries	AcEvaluatedPerformance.getActionSeries()
AcInteractionSeries	AcInteractionSeries.getParent()

Methods in com.banda.chemistry.domain that return types with arguments of type AcInteractionSeries

Modifier and Type	Method and Description
Collection<AcInteractionSeries>	AcInteractionSeries.getSubActionSeries()

Methods in com.banda.chemistry.domain with parameters of type AcInteractionSeries

Modifier and Type	Method and Description
void	AcInteractionSeries.addSubActionSeries(AcInteractionSeries subActionSeries)
void	AcInteractionSeries.removeSubActionSeries(AcInteractionSeries subActionSeries)
protected void	AcInteraction.setActionSeries(AcInteractionSeries actionSeries)
void	AcEvaluatedActionSeries.setActionSeries(AcInteractionSeries actionSeries)
void	AcEvaluatedPerformance.setActionSeries(AcInteractionSeries actionSeries)
void	AcInteractionSeries.setParent(AcInteractionSeries parent)

Method parameters in com.banda.chemistry.domain with type arguments of type AcInteractionSeries

Modifier and Type	Method and Description
void	AcInteractionSeries.setSubActionSeries(Collection<AcInteractionSeries> subActionSeries)