Uses of Class
com.banda.chemistry.domain.AcSpeciesReactionAssociation

Packages that use AcSpeciesReactionAssociation

Package	Description
com.banda.chemistry.business
com.banda.chemistry.domain

Uses of AcSpeciesReactionAssociation in com.banda.chemistry.business

Methods in com.banda.chemistry.business that return types with arguments of type AcSpeciesReactionAssociation

Modifier and Type	Method and Description
protected Collection<AcSpeciesReactionAssociation>	AcKineticsBO.getCatalystAssocs()
protected Collection<AcSpeciesReactionAssociation>	AcKineticsBO.getInhibitorAssocs()
protected Collection<AcSpeciesReactionAssociation>	AcKineticsBO.getProductAssocs()
protected Collection<AcSpeciesReactionAssociation>	AcKineticsBO.getReactantAssocs()
Set<AcSpeciesReactionAssociation>	ArtificialChemistryUtil.getSpeciesAssociations(AcSpeciesSet speciesSet, Double[] stoichiometricVector)

Methods in com.banda.chemistry.business with parameters of type AcSpeciesReactionAssociation

Modifier and Type	Method and Description
String	ArtificialChemistryUtil.getVariablePlaceholder(AcSpeciesReactionAssociation speciesAssoc)

Method parameters in com.banda.chemistry.business with type arguments of type AcSpeciesReactionAssociation

Modifier and Type	Method and Description
String	ArtificialChemistryUtil.createFoldExpression(Collection<AcSpeciesReactionAssociation> speciesAssociations, AcCollectiveSpeciesReactionAssociationType collectiveSpeciesReactionAssociationType, boolean wrapIfNeeded)
String	ArtificialChemistryUtil.createFoldOrderedExpression(Collection<AcSpeciesReactionAssociation> speciesAssociations, String operation, boolean wrapIfNeeded)
Collection<AcSpecies>	ArtificialChemistryUtil.getSpecies(Collection<AcSpeciesReactionAssociation> assocs)
<M extends AcVariable<?>> Collection<String>	ArtificialChemistryUtil.getSpeciesLabels(Collection<AcSpeciesReactionAssociation> speciesAssociations)
<M extends AcVariable<?>> Collection<String>	ArtificialChemistryUtil.getSpeciesLabelsWithStoichiometry(Collection<AcSpeciesReactionAssociation> speciesAssociations)
void	ArtificialChemistryUtil.updateSpeciesAssociations(Collection<AcSpeciesReactionAssociation> newSpeciesAssociations, AcSpeciesAssociationType assocType, AcReaction reaction)
String	ArtificialChemistryUtil.wrapIfNeeded(String expression, Collection<AcSpeciesReactionAssociation> speciesAssociations)

Uses of AcSpeciesReactionAssociation in com.banda.chemistry.domain

Methods in com.banda.chemistry.domain that return types with arguments of type AcSpeciesReactionAssociation

Modifier and Type	Method and Description
static Collection<AcSpeciesReactionAssociation>	AcSpeciesReactionAssociation.createCollection(Collection<AcSpecies> species, AcSpeciesAssociationType assocType)
static Set<AcSpeciesReactionAssociation>	AcSpeciesReactionAssociation.filterType(Set<AcSpeciesReactionAssociation> speciesAssociations, AcSpeciesAssociationType assocType)
Set<AcSpeciesReactionAssociation>	AcReaction.getSpeciesAssociations()
List<AcSpeciesReactionAssociation>	AcReaction.getSpeciesAssociations(AcSpeciesAssociationType assocType)

Methods in com.banda.chemistry.domain with parameters of type AcSpeciesReactionAssociation

Modifier and Type	Method and Description
void	AcReaction.addSpeciesAssociation(AcSpeciesReactionAssociation specAssoc)
void	AcReaction.addSpeciesAssociation(AcSpeciesReactionAssociation specAssociation, AcSpeciesAssociationType assocType)
int	AcSpeciesReactionAssociation.AcSpeciesReactionAssociationIndexComparator.compare(AcSpeciesReactionAssociation var1, AcSpeciesReactionAssociation var2)
int	AcSpeciesReactionAssociation.AcSpeciesReactionAssociationLabelComparator.compare(AcSpeciesReactionAssociation var1, AcSpeciesReactionAssociation var2)
int	AcSpeciesReactionAssociation.AcSpeciesReactionAssociationOrderComparator.compare(AcSpeciesReactionAssociation var1, AcSpeciesReactionAssociation var2)
void	AcReaction.removeSpeciesAssociation(AcSpeciesReactionAssociation specAssoc)

Method parameters in com.banda.chemistry.domain with type arguments of type AcSpeciesReactionAssociation

Modifier and Type	Method and Description
void	AcReaction.addSpeciesAssociations(Collection<AcSpeciesReactionAssociation> specAssocs)
void	AcReaction.addSpeciesAssociations(Collection<AcSpeciesReactionAssociation> specAssociations, AcSpeciesAssociationType assocType)
static Set<AcSpeciesReactionAssociation>	AcSpeciesReactionAssociation.filterType(Set<AcSpeciesReactionAssociation> speciesAssociations, AcSpeciesAssociationType assocType)
void	AcReaction.removeSpeciesAssociations(Collection<AcSpeciesReactionAssociation> specAssocs)
void	AcReaction.setSpeciesAssociations(Collection<AcSpeciesReactionAssociation> specAssociations, AcSpeciesAssociationType assocType)
void	AcReaction.setSpeciesAssociations(Set<AcSpeciesReactionAssociation> speciesAssociations)
static void	AcSpeciesReactionAssociation.setType(Collection<AcSpeciesReactionAssociation> speciesAssociations, AcSpeciesAssociationType assocType)