com.banda.chemistry.business

Class AcDNAStrandDisplacementConverter

java.lang.Object

com.banda.chemistry.business.AcReactionSetConverter

com.banda.chemistry.business.AcDNAStrandDisplacementConverter

public class AcDNAStrandDisplacementConverter
extends AcReactionSetConverter

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	AcDNAStrandDisplacementConverter.AcDNAStrandCoversionStats

Field Summary

Fields inherited from class com.banda.chemistry.business.AcReactionSetConverter

acUtil, replicator

Constructor Summary

Constructors

Constructor and Description
AcDNAStrandDisplacementConverter(AcReactionSet inputReactionSet, double CMax, boolean includeWaste)

Method Summary

Methods

Modifier and Type	Method and Description
protected Collection<AcReaction>	convert(AcReaction inputReaction)
AcDNAStrandDisplacementConverter.AcDNAStrandCoversionStats	getStats()
protected boolean	isConvertible(AcReaction inputReaction)
protected void	validate(AcReaction inputReaction)

Methods inherited from class com.banda.chemistry.business.AcReactionSetConverter

addReactions, addSpecies, convert, getInputReactions, getInputReactionSet, getInputSpeciesSet, getOutputSpeciesSet, removeReaction, validate

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AcDNAStrandDisplacementConverter

public AcDNAStrandDisplacementConverter(AcReactionSet inputReactionSet,
                                double CMax,
                                boolean includeWaste)

Method Detail

validate

protected void validate(AcReaction inputReaction)

Specified by:

validate in class AcReactionSetConverter

isConvertible

protected boolean isConvertible(AcReaction inputReaction)

Specified by:

isConvertible in class AcReactionSetConverter

getStats

public AcDNAStrandDisplacementConverter.AcDNAStrandCoversionStats getStats()

convert

protected Collection<AcReaction> convert(AcReaction inputReaction)

Specified by:

convert in class AcReactionSetConverter